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Scientist, Computational Biology

Visterra

Waltham, MAOnsitePosted 6 days ago$135,250 - $168,000
Full TimeEntry LevelBioinformatics & Data ScienceBiotechnology
Original posting ↗

Summary

Visterra is seeking a Scientist to join our Genomics Platform team, which directly supports target identification, indication prioritization and supporting progression of drug candidates in clinical development. The team uses single-cell multi-omics, spatial transcriptomics, and human genetics to characterize human disease in kidney, autoimmune, and neurodegenerative indications.

Job description

The Opportunity

Visterra is seeking a Scientist to join our Genomics Platform team, which directly supports target identification, indication prioritization and supporting progression of drug candidates in clinical development. The team uses single-cell multi-omics, spatial transcriptomics, and human genetics to characterize human disease in kidney, autoimmune, and neurodegenerative indications.

The Scientist will own projects end to end, from initial QC to biological interpretations and insights. This involves framing the question with program teams, shaping experimental designs for omics data generation, analyzing internally generated and public human datasets, and presenting the answer to stakeholders, including collaborating teams and senior management.

How you will have an impact

  • Find new targets. Analyze human disease tissue, including AMP AIM datasets across autoimmune diseases, to identify pathogenic cell states and the molecules that hold them in place, then partner with a discovery team as they develop biologics against the target you proposed.
  • Decide where a drug goes. Integrate genetic, single-cell, and spatial evidence across diseases to prioritize indications for targets already in the pipeline.
  • Explore new mechanisms of neurodegenerative diseases. Integrate genetic evidence across diseases and pathways, and explore immune mechanisms in neurodegenerative disease, as a source of new targets.
  • Build the platform. Extend the internal genetics platform with new modules and tools, and help build the agentic workflows the team runs it with.

Responsibilities

  • Own projects from question to recommendation: quality control, analysis, interpretation, and presentation.
  • Integrate population-level genetic data such as GWAS summary statistics, eQTL resources, and fine-mapping results with single-cell and spatial data to connect genetic risk to specific cell types, cell states, and genes.
  • Translate findings into clear recommendations for discovery and translational program teams, and present them to colleagues and senior management.
  • Maintain and extend the team’s toolsets, genetics platform, and agentic workflows, evaluating and adopting new methods and tools as the field moves.
  • Contribute to academic collaborations, conference presentations, and publications.

Requirements

  • Ph.D. in computational biology, bioinformatics, human genetics, or a related field, or equivalent experience.
  • Hands-on experience in single-cell or spatial transcriptomics analysis, in statistical genetics (GWAS, eQTL, fine-mapping, colocalization), or in both.
  • Proficiency in Python and/or R and familiarity with standard toolkits such as Scanpy, Seurat, PLINK, and LDSC.
  • Experience with cloud or high-performance computing environments.
  • Ability to explain complex analyses clearly to biologists, program teams, and senior management, in writing and in person.
  • Curiosity about disease biology and motivation to see your analyses change the direction of a drug program.

Preferences

  • Background in immunology, nephrology, or neuroscience.
  • Experience using agentic AI coding tools, or interest in building analysis workflows with them.
  • First-author publications or preprints in computational biology or human genetics.
  • 0-2 years of previous industry experience.

Requirements

  • Ph.D. in computational biology, bioinformatics, human genetics, or a related field, or equivalent experience
  • Hands-on experience in single-cell or spatial transcriptomics analysis, in statistical genetics (GWAS, eQTL, fine-mapping, colocalization), or in both
  • Proficiency in Python and/or R
  • Familiarity with standard toolkits such as Scanpy, Seurat, PLINK, and LDSC
  • Experience with cloud or high-performance computing environments
  • Ability to explain complex analyses clearly to biologists, program teams, and senior management, in writing and in person
  • Curiosity about disease biology and motivation to see your analyses change the direction of a drug program

Benefits

  • Conference travel support
  • Publication fees support

Company overview

Visterra is a clinical-stage biotechnology company headquartered in Waltham, Massachusetts, that specializes in developing innovative antibody-based therapies for patients with kidney diseases and other hard-to-treat conditions. Founded in 2008 and now operating as a wholly-owned subsidiary of Otsuka Pharmaceutical, Visterra leverages its proprietary technology platform to design and engineer precision antibody-based product candidates that specifically bind to and modulate key disease targets. The company focuses on addressing disease targets not adequately served by traditional therapeutic approaches, with its most advanced program, sibeprenlimab (VIS649), currently in Phase 2 clinical development for immunoglobulin A nephropathy (IgAN). Visterra has established multiple partnerships to advance novel antibodies for significant diseases with limited treatment options and has been recognized as a BioSpace Best Place to Work for three consecutive years (2024-2026). The company employs approximately 110-150 professionals and maintains a robust pipeline with three programs in clinical development and additional candidates in preclinical stages.

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