Sr. Scientist I/II – Computational Biology
MacroGenics, Inc.
Summary
We are seeking a highly motivated and intellectually curious Computational Biologist to join our Translational Bioinformatics group. Operating in a highly collaborative and dynamic environment, this role is designed for a hands-on builder who thrives on high-quality biological data science that bridges biology and the clinic. You will serve as a vital technical partner, translating raw data (genomics, proteomics, flow cytometry, pathology) into actionable biological and clinical insights that drive our pipeline forward.
Job description
Responsibilities and Job Duties
- Multi-Omic Integration: Lead the technical execution and integration of diverse datasets across multiple pipelines. Manage data ingestion from external CROs and internal labs, combining internal high-dimensional datasets (Flow Cytometry, Digital Pathology) with large-scale molecular profiling data (Genomics, Transcriptomics, Proteomics).
- High-Performance Computing: Build, scale, and optimize processing pipelines within Cloud Computing to efficiently manage high-dimensional biomarker measurements.
- Provenance and reproducibility: Enforce strict version control, containerization, and rigorous documentation to ensure all analyses are fully reproducible, auditable, and transferable across the Translational Medicine team.
- Algorithmic Insight & Custom Analysis: Evaluate standard methodologies, identify limitations, and develop, maintain, or modify custom scripts and computational tools to address complex biological questions.
- Data Processing & Reporting: Translate raw, complex multi-omic data into clear, high-fidelity scientific data packages and executive-ready visualizations that support informed decision-making related to clinical programs and asset development. Build, maintain, and document robust, reproducible code infrastructure to streamline data extraction, enabling rapid-turnaround on cross-functional reporting.
- Cross-Functional Collaboration: Partner closely with Clinical Development, Biostatistics, and Translational Medicine colleagues to co-create data analysis strategies, validate clinical hypotheses, and design robust translational frameworks.
Qualifications
Sr. Scientist I: PhD in a quantitative field (Computational Biology, Bioinformatics, Genetics, Genomics, Biophysics, Physics, or a related discipline). 0 – 2 years of full-time, post-PhD experience (academic or industry) demonstrating independent scientific project ownership, cross-functional teamwork, and navigating a fast-paced environment.
Sr. Scientist II: PhD in a quantitative field (Computational Biology, Bioinformatics, Genetics, Genomics, Biophysics, Physics, or a related discipline). 3+ years of full-time, post-PhD experience (academic or industry) demonstrating independent scientific project ownership, cross-functional teamwork, and navigating a fast-paced environment.
Knowledge, Skills, and Abilities
- Experience across standard modern biological data types including gene expression, genome sequencing, mutational profiling, and proteomics.
- Demonstrated comfort and autonomy working within Cloud Computing environments (AWS, Google Cloud) and/or traditional Linux High-Performance Computing (HPC) cluster infrastructures.
- Advanced proficiency in Python for data wrangling, statistical analysis, and data visualization.
- Experience with best software development practices, including rigorous documentation, testing, and version control (git).
- Ability to write robust, production-quality code completely independent of AI or agentic coding assistants.
- Deep understanding of the algorithmic basis behind common sequencing and data analysis tools.
- Demonstrated evidence of building published software.
Preferred Qualifications
- Prior hands-on experience working within Oncology or Immunology pathways, target identification, or biomarker discovery.
- Prior hands-on experience with AI/ML-enabled image analysis workflows.
- 2+ years working within a Biotech, Pharma, or structured translational research environment with cross-functional interactions.
- Familiarity with or exposure to agentic coding platforms.
- Experience handling data hand-offs and quality control from external CROs and proteomics/genomics vendors.
Requirements
- PhD in a quantitative field (Computational Biology, Bioinformatics, Genetics, Genomics, Biophysics, Physics, or related discipline)
- 0-2 years of full-time, post-PhD experience (academic or industry) for Sr. Scientist I
- 3+ years of full-time, post-PhD experience (academic or industry) for Sr. Scientist II
- Experience across standard modern biological data types including gene expression, genome sequencing, mutational profiling, and proteomics
- Demonstrated comfort and autonomy working within Cloud Computing environments (AWS, Google Cloud) and/or traditional Linux High-Performance Computing (HPC) cluster infrastructures
- Advanced proficiency in Python for data wrangling, statistical analysis, and data visualization
- Experience with best software development practices, including rigorous documentation, testing, and version control (git)
- Ability to write robust, production-quality code completely independent of AI or agentic coding assistants
- Deep understanding of the algorithmic basis behind common sequencing and data analysis tools
- Demonstrated evidence of building published software
Benefits
- Medical, Dental & Vision
- Prescription Coverage
- Employee Wellness Resources
- 401(k) Matching
- Employee Stock Purchase Plan
- Paid Time Off
- Paid Parental Leave
- Disability Benefits
- Discretionary Bonus
- Discretionary Equity Incentives
Company overview
MacroGenics, Inc. is a clinical-stage biopharmaceutical company focused on discovering and developing innovative monoclonal antibody-based therapeutics for the treatment of cancer. The company leverages its proprietary antibody-based technology platforms to create novel product candidates that target various cancer types. MacroGenics has developed several proprietary platforms including DART® (Dual-Affinity Re-Targeting) technology, which enables the creation of bispecific antibodies that can simultaneously bind to two different antigens. The company's pipeline includes multiple clinical-stage candidates targeting hematologic malignancies and solid tumors. MacroGenics' lead product candidate, margetuximab, is an Fc-optimized monoclonal antibody targeting HER2, which has shown promise in breast cancer and gastric cancer. The company collaborates with various pharmaceutical partners to advance its pipeline and has established itself as a leader in the field of antibody engineering and cancer immunotherapy.