Staff Research Associate I - Pediatrics - 140898
San Diego Supercomputer Center
Summary
Under the supervision of the Laboratory Manager, the Staff Research Associate 1 (SRA 1) assists with extracting, purifying, and analyzing DNA and RNA for Next-Gen Sequencing, and with new technology development in support of the research program, including documenting the feasibility of new technologies and testing of new technologies. The SRA 1 also assists in maintaining new equipment and technologies including Next Gen sequencing equipment.
Job description
The incumbent will assist with pushing microbiome research forward focusing on DNA and RNA sequencing from complex microbial communities (metagenomics and metatranscriptomics). The incumbent will assist with high-impact projects that seek to understand how the microbiome contributes to human traits ranging from response to diet to mental health, the roles of microbes in environments ranging from oceans to soils, and the connections between. Performs other duties as assigned.
Minimum Qualifications
- Theoretical knowledge of basic human genetics and molecular biology.
- Experience with biology techniques such as PCR, gel electrophoresis, sequence analysis, RT-PCR, DNA/RNA isolation within the past 2 years.
- Demonstrated ability to follow university Environmental Health and Safety requirements.
- Experienced in working and maintaining a sterile environment.
- Micropipetting and dilutions experience.
- Demonstrated knowledge of liquid handling automation and ability to use validated protocols.
- Demonstrated knowledge of next generation sequencing for high throughput pipeline.
- Ability to perform validated protocols.
- Ability to implement and troubleshoot protocols developed for high throughput sequencing pipeline.
Preferred Qualifications
- Experience writing/editing protocols and manuscripts.
- Computer skills using a Macintosh.
- Demonstrated experience with database management of clones/samples, including data entry, manipulation and creation of data reports.
Special Conditions
- Employment is subject to a criminal background check.
- Incumbent must be available to work 9AM – 7PM, Monday-Friday and on occasional weekends.
- Willing to work in a laboratory that collects, processes, stores, and assays biohazardous body fluids.
Requirements
- Theoretical knowledge of basic human genetics and molecular biology
- Experience with PCR, gel electrophoresis, sequence analysis, RT-PCR, DNA/RNA isolation within the past 2 years
- Demonstrated ability to follow university Environmental Health and Safety requirements
- Experienced in working and maintaining a sterile environment
- Micropipetting and dilutions experience
- Demonstrated knowledge of liquid handling automation and ability to use validated protocols
- Demonstrated knowledge of next generation sequencing for high throughput pipeline
- Ability to perform validated protocols
- Ability to implement and troubleshoot protocols developed for high throughput sequencing pipeline
- Experience writing/editing protocols and manuscripts
- Computer skills using a Macintosh
- Demonstrated experience with database management of clones/samples, including data entry, manipulation and creation of data reports
Benefits
- Criminal Background Check
- Vaccination Program Compliance
- Smoke & Tobacco Free Environment
- Drug Screening
Company overview
The San Diego Supercomputer Center (SDSC) is a world-renowned research institute and a leader in high-performance computing, data-intensive computing, and computational science. Established in 1985 and located at the University of California, San Diego, SDSC serves as a national resource for computational science and engineering. The center operates some of the most powerful supercomputers in the world, including Expanse and Voyager, which support thousands of researchers across diverse scientific domains. SDSC specializes in developing innovative computational tools, data management solutions, and advanced cyberinfrastructure that enable groundbreaking research in fields such as genomics, climate science, astrophysics, and biomedical research. As a key component of the National Science Foundation's cyberinfrastructure ecosystem, SDSC provides essential computational resources, expertise, and training to the national research community. The center's interdisciplinary approach combines computer science, domain science, and engineering to solve complex scientific challenges and advance computational methodologies.